miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|139267381|gb|AM535579.1|AM535579 TATGCAAAACTGCGAGCTGATGTACAACTTCAACGAGCTTGCTGTGACGATGAACGAGCCCGAGGATGATGTGGCGCCCA
CAGACAGCAGGATGAGACCTGATCAACGACTGATGGAAGACGGTTACTGGGACGAAGCTAATCAGGAGAAACTCAGGCTA
GAGGAGAAACAGAGGACAAAGAGAAAAAAGAGAGAAGCGGAAGCAGCCCTTGCGGCAGAAGCAGGCAAACCATTTGAAGG
CTATCGTCCCGTCTGGTTTGAAAGACGAATGGACCAGATTACCAAATCCATGGCATACACATACAGAGGAGAATACTGGA
ACAGCAAGGAAAAACAAGAATGGAACGTTTGCCCGGATATATTTTGATGTGAACTCTGCGATGAACATCTCTTTTTTTTT
TTCTCACCATCTGTCCATTTATCTTCCCGTTCGCAAATCGATCAGCAGACTTCTGCTGCAAGGGTGCTAAATCCCGCATT
GTTGTGGAGTAGTAAAGACATCCTCGGTGGCATAAGCTGTCAATCCACGTTCCAGTGGATCTTTGCAAACCGGAATCGGA
AAGCTGGTCAATGGACGGCATCTTGAAATTGAGATAAATGCTTTTGACTGTGGCAAATTTTTTTAATTTGCAAGGAGATT
AGAAAAGTTGCACTCAGAATTTATGGAATATTATAGAAGAGTTATGCTGGATTGATTATATCATTGGAGTACCAAGGATT
TATGCAAAACTATGCAAAACTATGCAAAACTATGCAAAACTATGCAAAACGCTTGT




Most similar to sp|P16258|OSBP1_RABIT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P16258|OSBP1_RABIT Oxysterol-binding protein 1 OS=Oryctolagus
            cuniculus GN=OSBP PE=1 SV=1
          Length = 809

 Score =  124 bits (311), Expect = 7e-28
 Identities = 57/120 (47%), Positives = 72/120 (60%)
 Frame = +2

Query: 5    QNCELMYNFNELAVTMNEPEDDVAPTDSRMRPDQRLMEDGYWDEANQXXXXXXXXXXXXX 184
            +N E MY F+ELA+T+N  E   APTDSR+RPDQRLME+G WDEAN              
Sbjct: 690  KNAENMYYFSELALTLNAWEGGTAPTDSRLRPDQRLMENGRWDEANAEKQRLEEKQRLSR 749

Query: 185  XXXXXXXXXXXXXXXPFEGYRPVWFERRMDQITKSMAYTYRGEYWNSKEKQEWNVCPDIF 364
                           P++ Y+ +WFER+ D +TK + + YRGEYW  KEKQ+WN CPDIF
Sbjct: 750  KKREAEAMKATEDGTPYDPYKALWFERKKDPVTKELTHIYRGEYWECKEKQDWNSCPDIF 809